Re: [AMBER] NAMD_AMBER_MD

From: Shomesankar Bhunia <rightclickatrighttime.gmail.com>
Date: Sat, 28 Sep 2013 08:44:53 +0530

Thank you.


On Fri, Sep 27, 2013 at 9:25 PM, Jason Swails <jason.swails.gmail.com>wrote:

> On Fri, Sep 27, 2013 at 11:42 AM, Shomesankar Bhunia <
> rightclickatrighttime.gmail.com> wrote:
>
> > Dear all,
> > Please suggest me a good tutorial for NAMD using AMBER FF where i can
> > perform minimization, equlibriation and simulation of a protein ligand
> > complex. I am eager to get a suitable configuration file for the above
> > processes. My trial and error process is going on.Thanks in advance.
> >
>
> This is what Google points me to:
>
> http://www.ks.uiuc.edu/Research/namd/2.6/ug/node15.html [NAMD's
> documentation]
> http://ambermd.org/namd/namd_amber.html [Amber's documentation]
>
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> >
>
>
>
> --
> Jason M. Swails
> BioMaPS,
> Rutgers University
> Postdoctoral Researcher
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Received on Fri Sep 27 2013 - 20:30:03 PDT
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