Re: [AMBER] How do I use MMPBSA.py for namd .dcd file?

From: sudipta <sudipta.mml.gmail.com>
Date: Mon, 16 Sep 2013 13:05:28 -0400

Another thing, the chamber generated .prmtop and .inpcrd files can't
produce output with amber 9 sander.MPI. However, it is showing sander.MPI
is running. That means chamber generated files cannot be used with amber 9.
Is it true? Although, it is silly but I want to make sure that.


On Mon, Sep 16, 2013 at 12:20 PM, Jason Swails <jason.swails.gmail.com>wrote:

> On Mon, Sep 16, 2013 at 11:25 AM, sudipta <sudipta.mml.gmail.com> wrote:
>
> > Will AMBER 9 work instead of AMBER 12. I have only AMBER 9.
> >
>
> No. You need at least Amber 11.
>
> All the best,
> Jason
>
> --
> Jason M. Swails
> BioMaPS,
> Rutgers University
> Postdoctoral Researcher
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>
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Received on Mon Sep 16 2013 - 10:30:03 PDT
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