Dear Jason,
Thanks for the info. I could compile. Thanks for the advice too regarding installing amber not in root.
Regards
Vijay Manickam Achari
(Phd Student c/o Prof Rauzah Hashim)
Chemistry Department,
University of Malaya,
Malaysia
vjramana.gmail.com
________________________________
From: Jason Swails <jason.swails.gmail.com>
To: Vijay Manickam Achari <vjrajamany.yahoo.com>; AMBER Mailing List <amber.ambermd.org>
Sent: Tuesday, 3 September 2013, 20:11
Subject: Re: [AMBER] problem in installing AmberTools13
On Tue, Sep 3, 2013 at 4:21 AM, Vijay Manickam Achari
<vjrajamany.yahoo.com>wrote:
> Yes sir. I have tried many times. I even restarted my server several times.
> But in avail.
>
> Is there any other method to do?
>
This may have meant a temporary issue with the Amber server (it's up now,
but I'm not sure if there were issues at the time when you tried updating).
It could also be a very slow connection. You can also try lengthening the
amount of time that update_amber will wait for a response with the
--timeout flag. So perhaps something like this:
./update_amber --timeout 20 --update
This increases the waiting time from 10 seconds (default) to 20 seconds.
Good luck,
Jason
--
Jason M. Swails
BioMaPS,
Rutgers University
Postdoctoral Researcher
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Received on Tue Sep 03 2013 - 08:30:04 PDT
