On Fri, Aug 02, 2013, Asmita Gupta wrote:
> Ok...all the simulations are 200ns long...and this fraying is observed
> after 50ns and lasts till 100-150ns..but what is an "activated
> event"....also, none of the fraying effects observed in ff12sb were there
> when i used CHARMM36..so is it a force field dependent process?
An actived event is one that has to cross a free energy barrier to happen.
Rest of the question is way beyond my level of knowledge; others on the list
may be more familiar with fraying and with CHARMM36.
...dac
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Received on Fri Aug 02 2013 - 10:30:20 PDT
