Re: [AMBER] Interaction energy-based residue-residue correlation matrix

From: anu chandra <anu80125.gmail.com>
Date: Mon, 29 Jul 2013 12:06:13 +0530

Dear Amber users,

Sorry that I couldn’t attach the article with last mail. Please excuse me.

Does PTRAJ or MMPBSA module in Amber have an option to do the interaction
energy-based residue-residue correlation analysis. Please see the Equations
1 - 6 in the methodology section in the attached article for the details of
interaction energy based correlation analysis.


Waiting for your valuable reply.

Thanks in advance


On Mon, Jul 29, 2013 at 11:52 AM, Kshatresh Dutta Dubey <kshatresh.gmail.com
> wrote:

> I am unable to find the attachment or any equation.
>
>
> On Mon, Jul 29, 2013 at 11:24 AM, anu chandra <anu80125.gmail.com> wrote:
>
> > Dear Amber users,
> >
> > Does PTRAJ or MMPBSA module in Amber have an option to do the interaction
> > energy-based residue-residue correlation analysis. Please see the
> Equations
> > 1 - 6 in the methodology section in the attached article for the details
> of
> > interaction energy based correlation analysis.
> >
> >
> > Waiting for your valuable reply.
> >
> > Thanks in advance
> >
> > Anu
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
>
>
>
> --
> With best regards
>
> *******************************************************************************************************************
> Kshatresh Dutta Dubey, PhD
> Post Doctoral Fellow
> Indian Institute of Technology Kanpur
> Kanpur, India
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>


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Received on Mon Jul 29 2013 - 00:00:03 PDT
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