[AMBER] Amber12 installation on SGI cluster

From: George Tzotzos <gtzotzos.me.com>
Date: Thu, 11 Jul 2013 11:51:25 -0300

I've been trying to help our IT people install Amber12 on the following system:

SGI Specs SGI ICE X
OS - SUSE Linux Enterprise Server 11 SP2
Kernel Version: 3.0.38-0.5

Compilers installed Version Location
gcc 4.6.3 /usr/local/bin/ *
gfortran 4.6.3 /usr/local/bin/ *
ifort 13.0.1 20121010 /opt/intel/bin/ifort

./configure gnu or intel aborts giving the message:

georgios.itvds0:~/MD/amber12> ./configure intel
Checking for updates...
Checking for available patches online. This may take a few seconds...
NoInternetAccess: Cannot connect to http://ambermd.org
Check for updates failed.
ERROR: the X11 libraries are not in the usual location !
      To search for them try the command: locate libXt
      On new Fedora OS's install the libXt-devel libXext-devel
      libX11-devel libICE-devel libSM-devel packages.
      On old Fedora OS's install the xorg-x11-devel package.
      On RedHat OS's install the XFree86-devel package.
      On Ubuntu OS's install the xorg-dev package.
      To build Amber without XLEaP, re-run configure with '-noX11:
           ./configure -noX11 gnu
Configure failed due to the errors above!

I'd be grateful for any advice on which of the above X11 packages needs to be installed prior to installing Amber.

Thanks in advance

George
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Received on Thu Jul 11 2013 - 08:00:04 PDT
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