Re: [AMBER] Is it possible to merge static PDB files of the same PDB ID to become a mdcrd file?

From: Yip Yew Mun <>
Date: Fri, 5 Jul 2013 23:47:17 +0800

Okie, I'm officially stuck. How do I use cpptraj to convert PDB to mdcrd? ><

Yip Yew Mun
Graduate, Masters
Chemistry and Biological Chemistry
School of Physical and Mathematical Sciences
Nanyang Technological University

On 05-Jul-2013, at 8:43 PM, David A Case wrote:

> On Fri, Jul 05, 2013, Yip Yew Mun wrote:
>> I wish to ask if it's possible to produce a trajectory for a PDB file,
>> where its frames are all made up of the same PDB file? Because I'm
>> running DSSP analysis using a DSSP module that is not in AMBER and it
>> requires a mdcrd file.
> It's hard to understand exactly what you want, but cpptraj can convert PDB
> files to and from mdcrd format.
> ...dac
> _______________________________________________
> AMBER mailing list

AMBER mailing list
Received on Fri Jul 05 2013 - 09:00:02 PDT
Custom Search