Dear All,
I am unable to do Alanine scan for the terminal residues of my peptides.
Could it be that the terminal residues cannot be used correctly in MMPBSA
since they might contain OXT and NH3 atoms in the atom number does not
match.
I saw that a similar question was asked
http://archive.ambermd.org/201303/0372.html and with no reply.
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Sat Jun 08 2013 - 23:30:02 PDT
