Re: [AMBER] cpptraj strange warning with cluster command

From: Miguel Ortiz Lombardía <miguel.ortiz-lombardia.afmb.univ-mrs.fr>
Date: Mon, 13 May 2013 18:08:40 +0200

Hi Dan,

Thanks to you for the explanation.

Cheers,

Miguel Ortiz Lombardía

Architecture et Fonction des Macromolécules Biologiques (UMR7257)
CNRS, Aix-Marseille Université
Case 932, 163 Avenue de Luminy, 13288 Marseille cedex 9, France
Tel: +33(0) 491 82 55 93
Fax: +33(0) 491 26 67 20
mailto:miguel.ortiz-lombardia.afmb.univ-mrs.fr
http://www.afmb.univ-mrs.fr/Miguel-Ortiz-Lombardia

Le 13/05/13 17:35, Daniel Roe a écrit :
> Hi,
>
>
> On Mon, May 13, 2013 at 9:26 AM, Miguel Ortiz Lombardía
> <miguel.ortiz-lombardia.afmb.univ-mrs.fr> wrote:
>>> Warning: [cluster] Not all arguments handled: [ rms ]
>
> This is an innocuous warning and can be ignored. What is happening is
> that cpptraj defaults to RMSD as a distance metric if nothing else is
> specified (i.e. dme or data). However it appears I never actually put
> the code in to grab out the keyword. So even though the correct
> behavior is obtained, the warning is printed because the argument is
> still technically active. This will be cleaned up in a future patch.
> Thanks for the report.
>
> -Dan
>

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Received on Mon May 13 2013 - 09:30:02 PDT
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