You'll need to make sure that the linker finds the relevant library probably by just installing the libXdmcp package.
________________________________________
From: Shozeb Haider [shozeb.software.gmail.com]
Sent: 02 May 2013 07:51
To: amber.ambermd.org
Subject: [AMBER] Amber 12 installation on GPU
Hello all
I am trying to do a simple serial installation of Amber 12 before I move
ahead with parallel installation. I have C2075 Tesla cards with Fedora 18
as my OS.
I do all the updates and run ./configure gnu
Then I make install
It gives me the following error. I have searched the mailing lists in vain
to find a solution to this message. Any help will be much appreciated.
Many thanks
Shozeb Haider
Queen's University of Belfast
gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -DHASGZ
-DHASBZ2 \
-o xaLeap basics.o sysdepend.o stringExtra.o varArray.o getline.o
avl.o pdb_format.o pdb_read.o pdb_sprntf.o pdb_sscanf.o pdb_write.o
vector.o zMatrix.o sort.o bag.o hash.o dictionary.o database.o nVector.o
ring.o matrix.o fortran.o displayer.o assoc.o atom.o byteArray.o
collection.o container.o internal.o list.o loop.o molecule.o oDouble.o
oInteger.o oString.o objekt.o parmSet.o residue.o unit.o unitio.o tripos.o
graphUtil.o select.o amber.o build.o elements.o library.o chirality.o
minimizer.o model.o parmLib.o pdbFile.o mol2File.o mol3File.o tools.o
variables.o parser.o help.o helptext.o octree.o commands.o mathop.o block.o
restraint.o hybrid.o xTank.o xAction.o x3d.o xBasics.o xaLeapc.o
xaUnitEditor.o xaTable.o xaAtomTable.o XrawRegistr.o xaCommand.o
xaTools.o xaAtomParmTable.o xaBondParmTable.o xaAngleParmTable.o
xaParmEditor.o xaTorsionParmTable.o xaImproperParmTable.o
xaHBondParmTable.o ../Xraw/libXaw.a ../Wc/libWcLeap.a ../Xpm/libXpm.a
../Xmu/libXmu.a -L/usr/lib64 -L/usr/lib -lXt -lXext -lSM -lICE -lX11 -lXau
-lXdmcp -lm -lpthread
/bin/ld: cannot find -lXdmcp
collect2: error: ld returned 1 exit status
make[4]: *** [xaLeap] Error 1
make[4]: Leaving directory `/usr/local/amber12/AmberTools/src/leap/src/leap'
make[3]: *** [install_xleap] Error 2
make[3]: Leaving directory `/usr/local/amber12/AmberTools/src/leap'
make[2]: *** [install] Error 2
make[2]: Leaving directory `/usr/local/amber12/AmberTools/src/leap'
make[1]: *** [serial] Error 2
make[1]: Leaving directory `/usr/local/amber12/AmberTools/src'
make: *** [install] Error 2
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Received on Thu May 02 2013 - 00:30:02 PDT
