[AMBER] aMD job failed

From: Albert <mailmd2011.gmail.com>
Date: Wed, 27 Mar 2013 08:21:05 +0100

Hello:

  I am trying to submit aMD jobs with CUDA runnning, but it failed with
following messages:



| Intermolecular bonds treatment:
| no_intermolecular_bonds = 1

| Energy averages sample interval:
| ene_avg_sampling = 1000

Ewald parameters:
      verbose = 0, ew_type = 0, nbflag = 1, use_pme
= 1
      vdwmeth = 1, eedmeth = 1, netfrc = 1
      Box X = 73.033 Box Y = 73.957 Box Z = 68.462
      Alpha = 90.000 Beta = 90.000 Gamma = 90.000
      NFFT1 = 80 NFFT2 = 80 NFFT3 = 72
      Cutoff= 12.000 Tol =0.100E-05
      Ewald Coefficient = 0.25795
      Interpolation order = 4

--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
    4. RESULTS
--------------------------------------------------------------------------------

  ---------------------------------------------------
  APPROXIMATING switch and d/dx switch using CUBIC SPLINE INTERPOLATION
  using 5000.0 points per unit in tabled values
  TESTING RELATIVE ERROR over r ranging from 0.0 to cutoff
| CHECK switch(x): max rel err = 0.2738E-14 at 2.422500
| CHECK d/dx switch(x): max rel err = 0.8987E-11 at 2.875760
  ---------------------------------------------------
|---------------------------------------------------
| APPROXIMATING direct energy using CUBIC SPLINE INTERPOLATION
| with 50.0 points per unit in tabled values
| Relative Error Limit not exceeded for r .gt. 2.24
| APPROXIMATING direct force using CUBIC SPLINE INTERPOLATION
| with 50.0 points per unit in tabled values
| Relative Error Limit not exceeded for r .gt. 2.71
|---------------------------------------------------


thank you very much
best
Albert

_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Wed Mar 27 2013 - 00:30:02 PDT
Custom Search