[AMBER] generate MDCRD file for two points

From: HM <scienceamber.gmail.com>
Date: Thu, 28 Feb 2013 13:00:32 +0100

Hi All,
I extracted the Center of mass of two domains. Now I want to visualize
these coordinates in VMD. For the same, I plan to make a new parameter and
coordinate files.

I am planning to do something line

prmtop file: only two atoms (say two C atom)

mdcrd file : coordinates of these two atoms in different time point.

I was just wondering if it is possible to make files with these
information..
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Received on Thu Feb 28 2013 - 04:30:03 PST
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