Did you put a $ before AMBERHOME?
Try
echo $AMBERHOME
and see if it points to /home/ayesha/amber/amber12
If so then $AMBERHOME/bin/tleap should work
Also try
echo $PATH
and see if it points to /home/ayesha/amber/amber12/bin
If so then you can just type tleap
-Dan
On Thu, Feb 14, 2013 at 12:00 PM, Ayesha Fatima
<ayeshafatima.69.gmail.com>wrote:
> Dear all, thank you for such useful posts.
> I have just installed amber 12 on ubuntu 12.04. previously i had the same
> amber 12 on ubuntu 12.10 and when i wanted to start my simulations my
> command line was
>
> ayesha.ayesha-HP-Z220-CMT-Workstation:~/amber/amber12$ AMBERHOME/bin/tleap
>
> my path in the bashrc file is set to "home/ayesha/amber/amber12"
>
> the tleap would start perfectly.
>
> However because ubuntu 12.10 was unstable on my machine, i changed to
> ubuntu 12.10.
> I installed both serial and parallel versions and also did the "make test"
> command which runs alright.
> now my issue is
>
> The same command line "ayesha.ayesha-HP-Z220-CMT-Workstation
> :~/amber/amber12$
> AMBERHOME/bin/tleap" does not work and i get
> "bash: AMBERHOME/bin/tleap: No such file or directory"
> i am not sure where the error is.
> Can anyone help?
> thanks
> ayesha
> phd candidate, UM/UPM, Malaysia
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> http://lists.ambermd.org/mailman/listinfo/amber
>
--
Dr. Daniel J. Sindhikara <http://www.dansindhikara.com/Information.html>
Ritsumeikan University <http://www.ritsumei.ac.jp/eng/>
sindhikara.gmail.com <http://www.dansindhikara.com>
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Received on Wed Feb 13 2013 - 19:30:03 PST
