Hello Sergey,
You might want to try "Bio3D in R". You can freely download this package
from this website:
http://users.mccammon.ucsd.edu/~bgrant/bio3d/
Let me know if you have any questions when install it.
Jane
On Thu, Jan 24, 2013 at 8:27 AM, Sergey Samsonov <
sergeys.biotec.tu-dresden.de> wrote:
> Hi all,
>
> I wonder if it is possible to carry out PCA analysis in the space of
> backbone dihedral angles of a protein (instead of cartesian space) using
> ptraj or other Amber tools?
> I found this question on the mailing list dated to 2009 but at that time
> there was no answer.
>
> Thanks and cheers,
>
> Sergey
>
> --
> Sergey A. Samsonov
> Postdoctoral researcher
> Structural Bioinformatics
> Biotechnology Center
> Tatzberg 47-51
> 01307 Dresden, Germany
>
> Tel: (+49) 351 463 400 83
> Fax: (+49) 351 463 402 87
> E-mail: sergey.samsonov.biotec.tu-dresden.de
> Webpage: www.biotec.tu-dresden.de
>
>
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Received on Thu Jan 24 2013 - 10:00:02 PST
