[AMBER] not getting dipole moment values in pmemd.cuda

From: Sanjib Paul <sanjib88paul.gmail.com>
Date: Tue, 1 Jan 2013 17:06:05 +0530

Dear Amber users and developers,
                                                     Is pmemd.cuda not
able to print dipole values? I am doing a simulation where I want
dipole moment values in output file. The input I am using like
following-

production md
 &cntrl
  imin = 0,
  irest =1,
  iwrap =0,
  ntx = 5,
  ioutfm = 1,
  ntb = 1,
  cut = 12.0,
  ntr = 0,
  ntc = 2,
  ntf = 2,
  tempi = 300.0,
  temp0 = 300.0,
  ntt = 3,
  gamma_ln = 1.0,
  nstlim = 500000,
  dt = 0.002,
  ntpr = 20,
  ntwr = 10000,
  ntwx = 20
 /
&dipoles
RES 1 10048
END
END

I am getting dipole moment values when I run sander, but not when it
is pmemd.cuda.

Your sincerely
Sanjib

_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Tue Jan 01 2013 - 04:00:02 PST
Custom Search