Thank you very much for your idea.
On Mon, Dec 10, 2012 at 2:19 AM, Aron Broom <broomsday.gmail.com> wrote:
> Well, you can load scripts into tleap via "-f scriptname". The script
> would have your commands. For the kind of think you're talking about, I've
> done the same commands for as many as 8000 proteins, in which case I just
> wrote a python script that output for me a very long txt file of the
> commands which I loaded as a script into tleap. So that is the solution I
> would recommend, rather than hoping to have loops and logic within leap,
> just use another languages loops and logic to output a command by command
> script.
>
> ~Aron
>
> On Mon, Dec 10, 2012 at 2:03 AM, Sajeewa Pemasinghe <sajeewasp.gmail.com
> >wrote:
>
> > Hi all,
> >
> > I have to run the same 3 commands on about 200 pdb files which are like
> > cdd1.pdb ,cdd2.pdb, cdd3.pdb.......cdd200.pdb. Is there any way I can get
> > this run by a script like (rough)
> >
> > for(int i=0;i<200;i++){
> >
> > command1 cddi.pdb
> > command2 cddi.pdb
> > command3 cddi.pdb
> >
> > }
> >
> > The question might sound naive but if there is a solution like above it
> > would save me tons of time. I really appreciate it.
> >
> > Thank you
> >
> > Sajeewa Dewage
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> >
>
>
>
> --
> Aron Broom M.Sc
> PhD Student
> Department of Chemistry
> University of Waterloo
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Received on Sun Dec 09 2012 - 23:30:03 PST
