Dear Sir,
Currently, I am using AMBER to solve one protein-DNA complex. I have got the protein structure in complex form by solution NMR, and the DNA has crystal structure. Inter molecular NOE can be used to calculate the complex structure. As there is no tutorial about simulation of protein-DNA complex, I wonder how to perform MD for the system of two separated structures with experimental data?
Thanks.
Samuel
--
Pengfei Ding
Beijing Nuclear Magnetic Resonance Center
School of Life Science
Peking University.
Beijing 100871, China.
Tel: +(86)-10-62767041
Email: pengfeiding.pku.edu.cn
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Received on Mon Nov 26 2012 - 23:30:02 PST
