Hi,
'parmstrip' works for me for stripping water from solvated systems
with no problems. There may be something specific to your topology
that is causing the segfault. Please send me (off-list) the topology
so I can recreate the error and track down any bugs. Thanks!
-Dan
On Tue, Nov 13, 2012 at 5:13 AM, Vlad Cojocaru
<vlad.cojocaru.mpi-muenster.mpg.de> wrote:
> Dear Amber users,
>
> I noticed that the "parmstrip :WAT" command in cpptraj leads to a
> segmentation fault at runtime (AMBER 12, AmberTools 12).
> I run different tests and this behavior is specific to "parmstrip".
> "strip :WAT" runs absolutely fine.
>
> Did any of you notice this ?
>
> Best wishes
> Vlad
>
> --
> Dr. Vlad Cojocaru
> Max Planck Institute for Molecular Biomedicine
> Department of Cell and Developmental Biology
> Röntgenstrasse 20, 48149 Münster, Germany
> Tel: +49-251-70365-324; Fax: +49-251-70365-399
> Email: vlad.cojocaru[at]mpi-muenster.mpg.de
> http://www.mpi-muenster.mpg.de/research/teams/groups/rgcojocaru
>
>
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--
-------------------------
Daniel R. Roe, PhD
Department of Medicinal Chemistry
University of Utah
30 South 2000 East, Room 201
Salt Lake City, UT 84112-5820
http://home.chpc.utah.edu/~cheatham/
(801) 587-9652
(801) 585-9119 (Fax)
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Received on Tue Nov 13 2012 - 07:30:02 PST
