How to use the 'cluster' command?
and what would be the output files?
*Best Regards,
Esam
*
On Thu, Oct 11, 2012 at 4:43 PM, Daniel Roe <daniel.r.roe.gmail.com> wrote:
> Hi,
>
> See the 'cluster' command for ptraj or cpptraj. Note that currently
> ptraj clustering has far more options than cpptraj. Refer to the
> AmberTools manual for more details.
>
> -Dan
>
> On Thu, Oct 11, 2012 at 8:37 AM, Esam Tolba <eatolba.gmail.com> wrote:
> > Hi all
> > Is there a command to cluster the trajectories according to the
> similarity
> > of the RMSD
> > *Best Regards,
> > Esam *
> > _______________________________________________
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>
>
>
> --
> -------------------------
> Daniel R. Roe, PhD
> Department of Medicinal Chemistry
> University of Utah
> 30 South 2000 East, Room 201
> Salt Lake City, UT 84112-5820
> http://home.chpc.utah.edu/~cheatham/
> (801) 587-9652
> (801) 585-9119 (Fax)
>
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Received on Wed Oct 17 2012 - 02:00:03 PDT
