Hi,
See the 'cluster' command for ptraj or cpptraj. Note that currently
ptraj clustering has far more options than cpptraj. Refer to the
AmberTools manual for more details.
-Dan
On Thu, Oct 11, 2012 at 8:37 AM, Esam Tolba <eatolba.gmail.com> wrote:
> Hi all
> Is there a command to cluster the trajectories according to the similarity
> of the RMSD
> *Best Regards,
> Esam *
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
--
-------------------------
Daniel R. Roe, PhD
Department of Medicinal Chemistry
University of Utah
30 South 2000 East, Room 201
Salt Lake City, UT 84112-5820
http://home.chpc.utah.edu/~cheatham/
(801) 587-9652
(801) 585-9119 (Fax)
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Thu Oct 11 2012 - 08:00:08 PDT
