Good day to all,
I have two question,
1) I have a mdcrd file with the size almost 4 GB. I tried to proceed checking rmsd using ptraj, but it gave me warning 'could not open mdcrd file with mode (r)'. I searched in archive, and found that the problem might due to file permission. So I change the mode from rw-rw-r to rwxrwx--x, but still it didnt work. I would be grateful if anyone could help me how to solve this, so that I can proceed with analysis.
2) Can we process a crash mdcrd file? If it possible, does it require any manual modification before analysis?
Thanks so much
Zalikha Ibrahim
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Received on Mon Sep 24 2012 - 17:00:02 PDT
