thanks!
On Mon, Sep 10, 2012 at 1:34 PM, ABEL Stephane 175950
<Stephane.ABEL.cea.fr>wrote:
> Hi,
>
> you can use the SCWRL program available at
> http://dunbrack.fccc.edu/scwrl4/SCWRL4.php to do a single or multiple
> mutation in your PDB. The program needs only a pdb file a AA sequence of
> your mutated peptide/protein.
>
> Stephane
>
> ________________________________________
> De : Jonathan Gough [jonathan.d.gough.gmail.com]
> Date d'envoi : lundi 10 septembre 2012 19:24
> À : AMBER Mailing List
> Objet : [AMBER] point mutation - residue swap
>
> Dear All,
>
> The basic (or complex) question I have is:
>
> How do you take a PDB and change one residue to another residue?
> (essentially a point mutation of an existing structure)
>
> I thought I remembered reading how it could be done, but looking back I
> can't seem to find where it might be. I can think of a few ways one could
> accomplish this, but I wanted to ask if there is an explanation in the
> manual or a tutorial that I am just missing. (Can someone point me in the
> right direction)
>
> 1. I searched the archives and saw some old posts regarding using other
> programs.
> 2. One could manually add/change things
> 3+????
>
> Not necessarily looking for a step by step but a push in the right
> direction.
>
> Thanks,
> JOnathan
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Received on Mon Sep 10 2012 - 11:00:04 PDT
