Re: [AMBER] Adding a ROH to a oligosaccharide

From: David A Case <case.biomaps.rutgers.edu>
Date: Wed, 5 Sep 2012 16:15:38 -0400

On Wed, Sep 05, 2012, Pedro Swagger wrote:

> X = loadpdb glycam.pdb
> N = sequence { ROH X }

Just to expand (I hope correctly!) on what Lachele suggested: what you
want to do with fiddle with "glycam.pdb" until leap is happy with it [see
Lachele's email for good advice on this]; then just do a "saveamberparm X
....". The sequence command above should not be needed.

....dac


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Received on Wed Sep 05 2012 - 13:30:02 PDT
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