On Tue, Sep 04, 2012, Carlos Simmerling wrote:
> my suggestion is based only on my personal experience and what i've seen in
> the literature- I don't have experience with igb=2 on nucleic acids. As I
> said before, you'll need to proceed with caution. Perhaps others on the
> list can let you know their experience too.
For double-stranded DNA, the following paper may help:
%A T. Gaillard
%A D.A. Case
%T Evaluation of DNA Force Fields in Implicit Solvation
%J J. Chem. Theory Comput.
%V 7
%P 3181-3198
%D 2011
....dac
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Received on Wed Sep 05 2012 - 06:00:05 PDT
