[AMBER] How to combine RMSF profiles?

From: Catein Catherine <askamber23.hotmail.com>
Date: Wed, 29 Aug 2012 13:49:05 +0800

Dear Sir/Madam,
I was trying to calculate the RMSF for a trajectory. Since it is a long trajectory (1000 ns), I cannot do the cpptraj analysis in one-goes with supercomputer with only 24G RAM. I have to do it step by step. However, I have a problem, if I want to plot RMSF (per residues) vs residue number for the whole trajectory, for instance if I got three profiles 1-300 ns, 301 to 600 ns and 601 to 1000 ns. What should I do to combine all the three profile into one single profile that represent the whole trajectory?
Best regards,
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Received on Tue Aug 28 2012 - 23:00:03 PDT
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