Hi.
Thanks for the reply.
I remove the strip :SOD,CLA in the input file and its working now. But
i do not what is the reason behind.
Thanks!
Regards,
Colvin
On 7/11/12, David A. Case <case.biomaps.rutgers.edu> wrote:
> On Tue, Jul 10, 2012, colvin wrote:
>
>> What is the Amber standard for backbone amide hydrogens for
>> N-terminal proline?
>
> You can use the "desc" command in LEaP to get all of the atom names in
> NPRO. (Amide hydrogens are H2 and H3).
>
> Note also that this is not the "Amber standard", but is rather the PDB and
> IUPAC standard.
>
> ....dac
>
>
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Received on Tue Jul 10 2012 - 19:00:03 PDT
