Re: [AMBER] atom type specification for chlorine

From: case <case.biomaps.rutgers.edu>
Date: Sat, 30 Jun 2012 08:27:35 -0400

On Fri, Jun 29, 2012, Sanjib Paul wrote:

> I am new in AMBER. For a test run I wanted to simulate
> unit "CHCL3BOX" given in residue template. But when I am going to create
> prmtop and inpcrd file in xleap, error messages are coming like "....could
> not find atom type CL".

Sounds like you are not loading the frcmod.chcl3 file:

loadAmberParams frcmod.chcl3

should do the trick.

...dac


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Received on Sat Jun 30 2012 - 05:30:03 PDT
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