[AMBER] implicit GB model for membrane simulation

From: houcemeddine othman <houcemeddine.othman.pasteur.rns.tn>
Date: Tue, 26 Jun 2012 23:11:59 +0000

Hi everyone,
Does the GB solvation model in AMBER is able to simulate an implicit membrane environment like those of CHARMM (IMMI, GBSA-IM). I have searched the reference manual of AMBER12 but i couldn't find anything about that.
What is the best practice in AMBER to study the binding of peptides to membrane proteins with MM-PBSA while reducing the computational resources?

best regards

Houceeddine OTHMAN

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Received on Tue Jun 26 2012 - 16:30:02 PDT
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