I am a Gromacs user and I have tried these parameters that are supposed to be compatible with the AMBER force fields:
http://web.me.com/jambeck/lipids/Downloads.html
And they work well for saturated PC lipids without applying a surface tension and apparently parameters for unsaturated lipids are on the way.
Used a real space cut off of 10 angstrom and a LJ cut off of 12 Angstrom and got good results compared to experiments.
I guess that these parameters are easy to use in AMBER...
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Received on Thu Jun 21 2012 - 23:30:02 PDT
