hello:
I am using the following command in tleap to add ions for my system
(0.15M Nacl + 12Na+ for neutrali system)
*addions2 mol Na+ 40 Cl- 28*
when the system is done, I visualized it in vmd and I found that there
are lots of ions not diffuse throughout the whole solvent but in the
corner of boundary box.... I am just curious is it normal?
here is a figure for it:
https://dl.dropbox.com/u/56271062/ion.jpg
thank you very much
best
Albert
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Received on Thu Jun 21 2012 - 06:30:02 PDT
