Re: [AMBER] umbrella sampling -- centroid or center of mass

From: David A. Case <case.biomaps.rutgers.edu>
Date: Fri, 15 Jun 2012 21:21:13 -0400

On Fri, Jun 15, 2012, Junjian Miao wrote:
>
> When doing umbrella sampling, whether ntf=ntc=2 is still able to be
> used in the above process?

Presence of absence to shake should be irrelevant to umbrella sampling: you
are only shaking the "real" bonds, not the restraints.

....dac


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Received on Fri Jun 15 2012 - 18:30:02 PDT
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