[AMBER] Problem with NAB: "Residue g not in library rna.amber94.rlb."

From: Romelia Salomon <romelia.caltech.edu>
Date: Tue, 5 Jun 2012 10:30:12 -0700 (PDT)

Hi!

I have couple questions about NAB.

1) I am trying to create a nucleotide sequence in a random configuration,
I am using link_na but I get the following error

Residue g not in library rna.amber94.rlb.

I also tried the example that comes in the manual "// Program 8 - create a
pseudoknot using distance geometry" as it uses similar calls to the one I
have and I still got the same error.


2) I need to substitute a nucleotide from a sequence, what would be the
best way to do it with NAB? Is


Thanks for your help! 


-- 
****************************************
Romelia Salomon
Walker Group
398 San Diego Supercomputing Center
UC San Diego
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Received on Tue Jun 05 2012 - 11:00:03 PDT
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