Re: [AMBER] is there a batch queue app?

From: Jonathan Gough <jonathan.d.gough.gmail.com>
Date: Fri, 1 Jun 2012 16:56:05 -0400

Thanks everyone.

I did some reading and I believe that torque can serve and run on a single
machine. I'll give that a try...

On Fri, Jun 1, 2012 at 4:02 PM, Anselm Horn <
Anselm.Horn.biochem.uni-erlangen.de> wrote:

> Dear Jonathan,
>
> >> is there a batch queue app that people use to run amber calculations on
> a
> >> single machine?
> >>
> >> I am familiar with pbs/torque/moab for clusters. But does anyone use or
> >> has anyone built one for a single machine and use it to run amber
> >> calculations?
> >>
> >> (I know someone built a simple one to run to run gamess calcs (gamessQ).
>
> we used OpenPBS for running jobs through a queue in serial mode on a
> server machine.
>
> The setup was rather easy at that time, because OpenPBS was part of our
> Linux distribution, at that time. We installed the complete package
> (server, mom, scheduler) and had all services started at boot time.
> Then, we used the machine for running local Amber jobs.
>
> The pbs/torque/moab way should thus be feasible.
>
> Regards,
>
> Anselm
>
>
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Received on Fri Jun 01 2012 - 14:00:02 PDT
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