dear all amber users,
i did the hb analysis ptraj,there's an output file which shows the
occupance and lifetime. i attached the file of name hbond.ptraj input file
and output, anal_hbond.out.
i dont know how could get understood result? what is exactly
does lifetiime mean? the average time of a hb between
frames?the frame here means the frame we used for the ptraj
analysis? another question i dont get is the time interval we
set . the hb command line ,what does this time interval mean?
Thanks for the concern.
Shradhey Gupta
Research scholar
C/O Prof. Pratik Sen
Department of Chemistry,
Indian Institute Of Technology,KANPUR
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Received on Thu May 31 2012 - 22:00:03 PDT
