[AMBER] mm_pbsa.pl analysis

From: bmartini <bmartini.ibt.unam.mx>
Date: Thu, 31 May 2012 10:52:27 -0500

 Hello everyone
 I have experienced some troubles calculating the free energy between a
 protein with two receptors and two ligands, each one bounded to its
 respective receptor. I have followed some tutorials on amberĀ“s web site,
 but they are intended to deal with systems where you have a receptor and
 a ligand. I understand that some changes have to be done in the
 mm_pbsa.pl in order to get the separated energy contribution for each
 receptor and its ligand. Could anyone give me a hand?


 Thanks in advance


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Received on Thu May 31 2012 - 09:30:03 PDT
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