What version of the GNU compilers are you using?
My suggestion is to use the exact compilers used in the example on the wiki
you were following.
Also, the real8 problem should have been fixed by a bugfix to AmberTools.
Please check that you have all bugfixes applied. (Since you applied one by
hand, use the command:
./patch_amber.py --update --ignore-fails
)
HTH,
Jason
On Mon, May 14, 2012 at 8:06 AM, Robert Oswald <robert.oswald.gmail.com>wrote:
> I am trying to install AmberTools12 and Amber12 on Mac OS X (10.7.3)
> following exactly the procedure described in:
>
> http://jswails.wikidot.com/installing-amber12-and-ambertools-12
>
> I had no problem installing AmberTools12 alone (except for having to fix
> the real8 problem in psfprm.F90). Installing with Amber 12, I have run into
> the following issue:
>
> gfortran -DBINTRAJ -c -O3 -mtune=native -ffree-form
> -I../../AmberTools/src/pbsa -I../../AmberTools/src/sqm
> -I../../AmberTools/src/rism -I../../include
> -I/Users/reo1/Documents/amber12/include
> -I/Users/reo1/Documents/amber12/include -o bintraj.o bintraj.F90
> bintraj.F90:119.27:
>
> call checkNCerror(nf90_put_att(vel_ncid, VelocVarID,
> "scale_factor", &
> 1
> Error: Generic function 'nf90_put_att' at (1) is not consistent with a
> specific intrinsic interface
> make[2]: *** [bintraj.o] Error 1
> make[1]: *** [serial] Error 2
> make: *** [install] Error 2
>
> I'd be grateful for any help in resolving this problem.
> Thanks,
> Robert Oswald
>
>
> --
> ********************************************
> Robert Oswald
> Department of Molecular Medicine
> Cornell University
> Ithaca, NY 14850
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
--
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Candidate
352-392-4032
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Received on Mon May 14 2012 - 08:30:03 PDT
