Jason,
I have added the debug_printlevel=2 to the general section. It is
showing the following error:
Reading command-line arguments and input files...
Loading and checking parameter files for compatibility...
sander found! Using sander
mmpbsa_py_energy found! Using
/home/srg/mhb75/Download/amber12/bin/mmpbsa_py_energy
cpptraj found! Using /home/srg/mhb75/Download/amber12/bin/cpptraj
Preparing trajectories for simulation...
50 frames were processed by cpptraj for use in calculation.
Beginning GB calculations with None
File "/home/srg/mhb75/Download/amber12/bin/MMPBSA.py", line 565, in ?
external_progs, '_MMPBSA_', normal_system)
File "/home/srg/mhb75/Download/amber12/bin/MMPBSA_mods/calculation.py",
line 91, in run_calculations
if 'mmpbsa_py_energy' in progs['gb']: incrd = '%scomplex.pdb' % prefix
TypeError: iterable argument required
Exiting. All files have been retained.
Is the python 2.4 version on my computer having issues with amber12tools?
mani
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Received on Mon Apr 30 2012 - 18:30:03 PDT
