Re: [AMBER] preparation of silver metal parameter file

From: FyD <>
Date: Sun, 29 Apr 2012 09:21:13 +0200

Dear Navin Jain,

> I would like to study the interactions of silver atoms (zero charge)
> with a protein molecule. However, I am facing difficulty in preparing
> silver parameter file. In addition, can anyone suggest the best force
> field to study metal protein interactions.

You could use R.E.D. Server Development .

This server handles almost all the elements of the periodic table.

A charge of zero for a Silver atom in a protein does not seem
realistic to me...

regards, Francois

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Received on Sun Apr 29 2012 - 00:30:04 PDT
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