[AMBER] AMBER 11 sander segmentation fault

From: Shuyi Cao <scao4.uic.edu>
Date: Mon, 23 Apr 2012 18:32:21 -0500

Dear Amber users,

I am trying to run simulation on a 300 aa protein with two inhibitors in
the binding site. I used antechamber to prepare the parameter and used
tleap to prepare my file and tried to run the simulation. No error message
is shown. When I tried to do the first minimization, the error message came
out as " Segmentation fault". I attached my file in the attachment. Could
anyone tell me how to solve this problem?

Thanks for any help!

Shuyi Cao
Graduate student
Department of Medicinal chemistry and Pharmacognosy
College of Pharmacy
Univerisity of Illinois at Chicago

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Received on Mon Apr 23 2012 - 17:00:03 PDT
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