Thanks for your help. I've tried gcc 4.3, 4.4 and 4.5 but get the same error each time. Is there anything else I could try?
Thanks,
Richard
On 22 Apr 2012, at 15:28, Jason Swails wrote:
> Hello,
>
> I had been meaning to get around to testing GCC 4.7, which just became a
> stable release 1 month ago. I just installed it on MacPorts, but haven't
> actually tested it yet.
>
> Given the number of compiling issues AmberTools 1.5/Amber 11 had when GCC
> 4.6 became stable, I'm not surprised this is happening. It looks like
> gfortran 4.7 is employing more strict type checking than older versions
> used to, which chamber no longer complies with.
>
> My suggestion is to use an older gcc since it will take some time to fix
> all of the issues, I think (I've tested the full range of gcc 4.3 -> gcc
> 4.6 at one point, and the performance on my Mac was the same). I use GCC
> 4.4 (4.5 was experimental, and buggy, when I started building Amber), and
> I've never had problems -- in fact that's the version I suggested on the
> Wiki as well. You can use the command "sudo port install gcc44" to install
> GCC 4.4 (you can also use 45, etc). This will not affect your GCC 4.7
> installation, and this part of the wiki:
> http://jswails.wikidot.com/mac-os-x#toc14 describes how to switch between
> active gcc versions (and Python versions if you're so inclined).
>
> HTH,
> Jason
>
> On Sunday, April 22, 2012, Richard Lonsdale wrote:
>
>> Hi all,
>>
>> I've been experiencing problems installing Ambertools 12 on my Mac. I have
>> OS X 10.7.3, Xcode 4.3.2, Macports 2.0.4 and am using gcc47 (as per
>> instructions on http://jswails.wikidot.com/mac-os-x#toc2).
>>
>> The installation runs fine until the chamber stage, where I get the
>> following error:
>>
>> make chamber
>> gfortran -DBINTRAJ -c -O3 -mtune=native -ffree-form
>> -I/Users/richlonsdale/programs/amber12/include
>> -I/Users/richlonsdale/programs/amber12/include -o psfprm.o psfprm.F90
>> psfprm.F90:3208.24:
>>
>> call deallocate_real(cg,amass)
>> 1
>> Error: Type mismatch in argument 'a0' at (1); passed REAL(10) to REAL(8)
>> psfprm.F90:3231.24:
>>
>> call deallocate_real(pk,pn,phase)
>> 1
>> Error: Type mismatch in argument 'a0' at (1); passed REAL(10) to REAL(8)
>> psfprm.F90:3249.24:
>>
>> call deallocate_real(cn1,cn2,rk,req)
>> 1
>> Error: Type mismatch in argument 'a0' at (1); passed REAL(10) to REAL(8)
>> psfprm.F90:3250.24:
>>
>> call deallocate_real(cn114,cn214)
>> 1
>> Error: Type mismatch in argument 'a0' at (1); passed REAL(10) to REAL(8)
>> psfprm.F90:3251.24:
>>
>> call deallocate_real(radii,screen)
>> 1
>> Error: Type mismatch in argument 'a0' at (1); passed REAL(10) to REAL(8)
>> psfprm.F90:3252.24:
>>
>> call deallocate_real(scnb_scale_factor,scee_scale_factor)
>> 1
>> Error: Type mismatch in argument 'a0' at (1); passed REAL(10) to REAL(8)
>> psfprm.F90:2754.21:
>>
>> call allreal(natom,radii,screen)
>> 1
>> Error: Type mismatch in argument 'a0' at (1); passed REAL(10) to REAL(8)
>> psfprm.F90:1084.25:
>>
>> call allreal(nfound,pk,pn,phase)
>> 1
>> Error: Type mismatch in argument 'a0' at (1); passed REAL(10) to REAL(8)
>> psfprm.F90:1085.25:
>>
>> call allreal(nfound,scnb_scale_factor,scee_scale_factor)
>> 1
>> Error: Type mismatch in argument 'a0' at (1); passed REAL(10) to REAL(8)
>> psfprm.F90:273.38:
>>
>> call allreal(ntypes*(ntypes+1)/2,cn1,cn2,cn114,cn214)
>> 1
>> Error: Type mismatch in argument 'a0' at (1); passed REAL(10) to REAL(8)
>> make[3]: *** [psfprm.o] Error 1
>> make[2]: *** [install] Error 2
>> make[1]: *** [serial] Error 2
>> make: *** [install] Error 2
>>
>>
>> Thanks in advance,
>>
>> Richard
>> _______________________________________________
>> AMBER mailing list
>> AMBER.ambermd.org
>> http://lists.ambermd.org/mailman/listinfo/amber
>>
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Received on Sun Apr 22 2012 - 11:30:02 PDT
