[AMBER] my ambertools 12 test

From: Acoot Brett <acootbrett.yahoo.com>
Date: Sat, 14 Apr 2012 08:42:55 -0700 (PDT)

 Dear All,
 
Ambertools 12 just installed and tested.
 
What is Rb.out? It gives the following difference, what is the reason? Which Ambertools 12 function cannot be used.
 possible FAILURE: check Rb.out.5.dif
/cygdrive/d/AMBER12/amber12/AmberTools/test/sas2test
143c143
< Norm of the constant vector: 117.0249163438
> Norm of the constant vector: 117.2479415082
144c144
< Norm of the residual vector: 0.0008971380771
> Norm of the residual vector: 0.0010436371770
145c145
< Convergence achieved : 7.6662142139444233E-6
> Convergence achieved : 8.9011130052131040E-6
147c147
< Etot = -92.3491 EKtot = 0. EPtot = 0.
> Etot = -90.9752 EKtot = 0. EPtot = 0.
 
 
IM.out.5 failure as following. Which function could be influenced?
 144c144
< Norm of the residual vector: 0.0008971380771
> Norm of the residual vector: 0.0010436371770
145c145
< Convergence achieved : 7.6662142139444233E-6
> Convergence achieved : 8.9011130052131040E-6
 
 
 
What is meoh_nh3.pm6-dh+.go.out? The difference file is as following. Which function could be influenced? 30c30
< H-bond energy = -2.64230609 kcal/mol ( -0.11457899 eV)
> H-bond energy = -2.65582375 kcal/mol ( -0.11516516 eV)
### Maximum absolute error in matching lines = 1.35e-02 at line 30 field 4
### Maximum relative error in matching lines = 5.12e-03 at line 30 field 4
 
 
How about the following check prog_out.txt.diff? Which function could be influenced?37,38c37,38
< | OPTION STORAGE = 408 bytes |
< | PRMTOP STORAGE = 3313 bytes |
---
>         |                OPTION STORAGE = 368 bytes                         |
>         |                PRMTOP STORAGE = 3201 bytes                        |
40c40
<         |  TOTAL ESTIMATED MEMORY USAGE = 5161 bytes                        |
---
>         |  TOTAL ESTIMATED MEMORY USAGE = 5009 bytes 
 
 
I am looking forward to getting your reply.
 
Cheers,
 
Acoot   
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Received on Sat Apr 14 2012 - 09:00:03 PDT
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