You can use PBSA in the latest AmberTool for this. The manual shows
the detailed procedure on how to use VMD or PYMOL to visualize it.
Ray
On Fri, Apr 13, 2012 at 9:43 PM, Sudarshan Debnath
<sudarshandebnath.ku.rediffmail.com> wrote:
> Dear amber community,
>
>
>
> I am a user of Amber11. I want to calculate electrostatic potential of a large protein molecule and map it on the molecular surface. Is it possible with out any 3rd party software (that does not present in Amber11 package)? If yes, what is the procedure? Please, let me know.
>
>
>
> With best regards,
>
> Sudarshan.
>
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Received on Fri Apr 13 2012 - 23:00:04 PDT
