Re: [AMBER] how to restrain the ligand in minimization and NVT equilibration step?

From: Carlos Simmerling <carlos.simmerling.gmail.com>
Date: Fri, 13 Apr 2012 13:21:34 -0400

it's probably easiest to use the residue number in the restraint mask.
check the restraintmask section of the manual for details.



On Fri, Apr 13, 2012 at 1:17 PM, Albert <mailmd2011.gmail.com> wrote:

> Hello:
>
> I am going to restrain my ligand with harmonic restrain during the
> minimization and NVT equilibration step. How can I do that? I only find
> restrain CA or backbone for the protein in the online tutorial but no
> guide for the ligand.....
>
> thank you very much
>
> Albert
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Received on Fri Apr 13 2012 - 10:30:04 PDT
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