[AMBER] Residue mismatch - Amber11

From: sławek bojarowski <slawcos.gmail.com>
Date: Tue, 10 Apr 2012 23:47:18 +0200

Hi,
I've got such as error, while using Amber11's MMPBS:

"Reading command-line arguments and input files...
Loading and checking parameter files for compatibility...
Error: Residue mismatch in your prmtop files! Complex res != Receptor res + Ligand res."

I'm counting electrostatic energy in uracil dimer and topology files look correct.
The "a" and "b" seems to be just a divided "ab".
Everything works correctly on Amber9 perl script.

My topology:





Best,
Slawek



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Received on Tue Apr 10 2012 - 15:00:09 PDT