[AMBER] How to calculate the energy contributed by hydrogen bonds?

From: bin wang <wang_p_z.yahoo.com.cn>
Date: Tue, 20 Mar 2012 05:00:51 +0800 (CST)

Dear Amber users,

I am running a simulation to calculate binding free energy between a peptide and a small molecule.  I used MMPBSA.py to get the binding energy.  From the results I can see the electrostatic terms and nonpolar terms, but can I also get similar information for the contribution from hydrogen bonds? 
Thank you for any suggestion.
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Received on Mon Mar 19 2012 - 14:30:02 PDT
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