> >
> > Currently it is not possible to run accurate membrane simulations in
> > AMBER,
>
> I would re-word this slightly: Currently, Amber does not support adding
> artificial terms in the pressure coupling to (partially) make up for
> deficiencies in many lipid force fields.
>
> The Amber developers are certainly willing to consider updates to
> address this
> situation.
To provide some additional info. It is our intention to produce a tutorial
showing how setup and run a membrane simulation in AMBER (using Chamber and
Lipid11), however this will not be until a month or so after the release of
AMBER 12. It will be posted on the tutorials page of the AMBER Website once
it is done.
'Ben: Remember to add this to your TODO list please'.
All the best
Ross
/\
\/
|\oss Walker
---------------------------------------------------------
| Assistant Research Professor |
| San Diego Supercomputer Center |
| Adjunct Assistant Professor |
| Dept. of Chemistry and Biochemistry |
| University of California San Diego |
| NVIDIA Fellow |
|
http://www.rosswalker.co.uk |
http://www.wmd-lab.org/ |
| Tel: +1 858 822 0854 | EMail:- ross.rosswalker.co.uk |
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Received on Tue Feb 28 2012 - 10:00:02 PST
