Dear Sangita Kachhap,
> I have not able run this command
>
> Shall I use link you have given in command line:
> xleap -f
> http://q4md-forcefieldtools.org/REDDB/projects/F-90/script1.ff
I ask you to excuse me; presenting this command was a bad idea...
This is just a project ;-)
> or I have to run command:
> xleap -f script1.ff
Yes this is the command you have to run...
> I have tried both fist one didnt run
>
> When try second, Its showing
>
>> POP = loadmol2 ./tripos1.mol2
> Could not open file ./tripos1.mol2: No such file or directory
Read the file script1.ff and you will see the following commands:
########## Activate the 89 lines below: perl -p -i.old -e
's/\#\#\!\# //g' script1.ff
########## Remove the 89 lines below: grep -v "to be replaced by the
correct tripos" script1.ff > script1-new.ff
these two commands have to be executed so that the mol2 file names
generated by R.E.D. corresponds to these stored in R.E.DD.B.
then xleap -f script1-new.ff
regards, Francois
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Mon Feb 27 2012 - 00:30:02 PST