[AMBER] use Restrain mask function in PMEMD

From: Muhammad Khaled Tumbi <khaledtumbi.gmail.com>
Date: Mon, 13 Feb 2012 14:45:49 +0530

I am Using PMEMD (.cuda) from AMBER11 package, Using GPU.
i am trying to restrain only backbone atoms of DNA, but as stated
in manual it is not available with PMEMD.
can anyone suggest me any alternative.

--
Tumbi Muhammed Khaled Abdul Waheed,
Research Scholar,
Department Of Pharmacoinformatics,
NIPER, S.A.S. Nagar, Mohali,
Punjab, India.
Mob. +91 78145 24855
www.niper.ac.in
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Received on Mon Feb 13 2012 - 01:30:02 PST
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