There are several temperature and pressure coupling options in sander and
pmemd, check the nvt and npt variables in the manual for more information.
Marc
On Wednesday, 25 January 2012, shahab shariati <shahab.shariati.gmail.com>
wrote:
> Dear all
>
> I used gromacs already.
>
> Now, I want to use amber 10 for md simulation.
>
> In gromacs, there are several options (berendsen or nose-hoover ....)
> for temperature and pressure coupling. Is there such state in amber?
> Is there same options in amber?
>
> any help will highly appreciated.
>
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>
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Received on Wed Jan 25 2012 - 04:30:04 PST
