I'm not sure it's that simple- in principle, Amber can do membrane
simulations and examples have been published. If one is thinking of a
particular simulation method that is wanted to enforce aspects of membrane
structure and perhaps stop the inaccurate force fields from doing bad
things, then it's a different question than just whether Amber can actually
run membrane simulations...
On Tue, Dec 20, 2011 at 6:54 PM, Albert <mailmd2011.gmail.com> wrote:
> As far as I know, Amber doesn't support membrane protein simulation. It
> is said that the next version of Amber may update this function.
>
>
>
> On 12/20/2011 04:56 PM, Rajesh Singh wrote:
> > Dear All,
> >
> > I am facing problems in performing MD of membrane proteins (GPCRs). I
> would
> > highly appreciate if anybody can provide me a tutorial for performing
> > membrane dynamics using AMBER.
> >
> > Thanks and regards
>
>
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Received on Tue Dec 20 2011 - 16:30:02 PST
